2016

Scientific articles        

570

Thormar J, Hasler-Sheetal H, Baden S, Bostrom C, Clausen KK, Krause-Jensen D, Olesen B, Rasmussen JR, Svensson CJ, Holmer M (2016) Eelgrass (Zostera marina) Food Web Structure in Different Environmental Settings. PLoS One 11, e0146479, DOI:10.1371/journal.pone.0146479. (01.16) [OA]

571

Robertson EK, Roberts KL, Burdorf LDW, Cook P, Thamdrup B (2016) Dissimilatory nitrate reduction to ammonium coupled to Fe(II) oxidation in sediments of a periodically hypoxic estuary. Limnology and Oceanography 61: 365-381. DOI: 10.1002/lno.10220 (01.16) [OA]

572

Zeng Y, Baumbach J, Barbosa EGV, Azevedo V, Zhang C, Koblížek M (2016) Metagenomic evidence for the presence of phototrophic Gemmatimonadetes bacteria in diverse environments. Environmental Microbiology Reports DOI:10.1111/1758-2229.12363 (01.16)

573

Pope EC, Bird DK, Arnórsson S, Giroud N (2016) Hydrogeology of the Krafla geothermal system, northeast Iceland. Geofluids 16: 175-197. DOI: 10.1111/gfl.12142  (01.16) [OA]

574

Zhang SC, Wang XM, Wang HJ, Bjerrum CB, Hammarlund EU, Costa MM, Connelly JN, Zhang BM, Su J, Canfield DE (2016) Sufficient oxygen for animal respiration 1,400 million years ago. PNAS 113: 1731-1736. (02.16) [OA]

575

Stief P, Kamp A, Thamdrup B, Glud RN (2016) Anaerobic nitrogen turnover by sinking diatom aggregates at varying ambient oxygen levels. Frontiers in Microbiology DOI:10.3389/fmicb.2016.00098 (02.16) [OA]

576

Rotaru A-E, Thamdrup B (2016) A new diet for methane oxidizers. Science 351, 658–660. DOI:10.1126/science.aaf0741. (02.16) 

577

Frei R, Crowe SA, Bau M, Polat A, Fowle DA, Døssing LN (2016) Oxidative elemental cycling under the low O2 Eoarchean atmosphere. Nature Scientific Reports 6: 21058. DOI:10.1038/SREP21058 (02.16) [OA]

578

Ivarsson M, Bengtson S, Neubeck A (2016) The igneous oceanic crust – Earth’s largest fungal habitat? Fungal Ecology 20: 249-255 (online 02.16)

579

Padilla C, Bristow LA, Sarode N, Garcia-Robledo E, Gomez Ramirez E, Benson C, Bourbonnais A, Altabet MA, Girguis PR, Thamdrup B and Stewart FJ. NC10 bacteria in marine oxygen minimum zones. ISME Journal. DOI: 10.1038/ismej.2015.262 (Advance online publication 26 February 2016) [OA]

580

Dähnke K, Thamdrup B (2016) Isotope fractionation and isotope decoupling during anammox and denitrification in marine sediments. Limnology and Oceanography 61: 610-624. DOI: 10.1002/lno.10237 (03.16) [OA]

581

Mendoza MLZ, Lundberg J, Ivarsson M, Campos P, Nylander JAA, Sallstedt T, Dalen L (2016) Metagenomic analysis from the interior of a speleothem in Tjuv-Ante’s Cave, Northern Sweden. PLOS One. DOI:10.1371/journal.pone.0151577 (03.16) [OA]

582

Chi Fru E, Rodríquez NP, Partin CA, Lalonde SV, Andersson P, Weiss DJ, El Albani A, Rodushkin I, Konhauser KO (2016) Cu isotopes in marine black shales record the Great Oxidation Event. Proceedings of the National Academy of Sciences of the United States of America. DOI: 10.1073/pnas.1523544113 (published ahead of print April 18, 2016 (04.16) [OA]

583

Zhang SC, Wang XM, Wang HJ, Bjerrum CB, Hammarlund EU, Dahl TW, Canfield DE (2016) Reply to Planavsky et al.: Strong evidence for high atmospheric oxygen levels 1,400 million years ago. PNAS 113: E2552-2553 (05.16) [OA]

584

Ivarsson M, Schnürer A, Bengtson S, Neubeck A (2016) Anaerobic fungi: A potential source of biological H2 in the oceanic crust. Frontiers in Microbiology 7:674. DOI:10.3389/fmicb.2016.00674 (published May 12, 2016 (05.16) [OA]

585

Rodler AS, Hohl SV, Guo Q, Frei R (2016) Chromium isotope stratigraphy of Ediacaran cap dolostones, Doushantuo Formation, South China. Chemical Geology 436: 24-34. (available online May 7) (05.16)

586

Weber HS, Thamdrup B, Habicht KS (2016) High sulfur isotope fractionation associated with anaerobic oxidation of methane in a low-sulfate, iron-rich environment. Frontiers in Earth Science 4:61. DOI: 10.3389/feart.2016.00061 (published June 1, 2016 (06.16) [OA]

587

Agić, H., Moczydlowska, M., Canfield, D.E. (2016) Reproductive cyst and operculum formation in the Cambrian-Ordovician galeate-plexus microfossils. GFF 138: 278-294. DOI:10.1080/11035897.2015.1116603 (06.16) [OA]

588

Löscher CR, Bange HW, Schmitz RA, Callbeck CM, Engel A, Hauss H, Kanzow T, Kiko R, Lavik G,  Loginova A, Melzner F, Meyer J, Neulinger SC, Pahlow M, Riebesell U, Schunck H, Thomsen S, Wagner H (2016) Water column biogeochemistry of oxygen minimum zones in the eastern tropical North Atlantic and eastern tropical South Pacific oceans. Biogeosciences 13: 3585-3606. DOI:10.5194/bg-13-3585-2016 (07.16) [OA]

589

Heisterkamp IM, Schramm A, de Beer D, Stief P. 2016. Direct nitrous oxide emission from the aquacultured Pacific white shrimp (Litopenaeus vannamei). Applied Environmental Microbiology 82:4028-4034. DOI:10.1128/AEM.00396-16. (07.16) [OA]

590

Attard KM. Hancke K, Sejr MK, GludRN (2016) Benthic primary production and mineralization in a High Arctic fjord: in situ assessments by aquatic eddy-covariance. Marine Ecology Progress Series 554: 35-50. DOI: 10.3354/meps11780. (07.16) [OA]

591

Gier J, Sommer S, Löscher CR, Dale AW, Schmitz RA, Treude T (2016) Nitrogn fixation in sediments along a depth transect through the Peruvian oxygen minimum zone. Biogeosciences 13: 4065-4080. DOI:10.5194/bg-13-4065-2016 (07.16) [OA]

592

Padilla CC, Bristow LA, Sarode N, Garcia-Robledo E, Ramírez EG, Benson CR, Bourbonnais A, Altabet MA, Girguis PR, Thamdrup B, Stewart FJ (2016) NC10 bacteria in marine oxygen minimum zones. ISME Journal 10: 2067-2071. DOI:10.1038/ismej.2015.262; (published online 26 February 2016) (08.16) [OA]

593

Tsementzi D, Wu J, Deutsch S, Nath S, Rodriguez-R LM, Burns AS, Ranjan P, Sarode N, Malmstrom RR, Padilla CC, Stone BK, Bristow LA, Larsen M, Glass JB, Thamdrup B, Woyke T, Konstantinidis KT, Stewart FJ (2016) SAR11 bacteria linked to ocean anoxia and nitrogen loss. Nature DOI:10.1038/nature19068 (published online 3 August 2016) (08.16) [OA]

594

Murniati E, Gross D, Herlina H, Hancke K, Glud RN, Lorke A (2016) Oxygen imaging at the sediment-water interface using lifetime-based laser induced fluorescence (τLIF) of nano-sized particles. Limnology and Oceanography: Methods 14: 506-517. DOI:10.1002/lom3.10108 (08.16) [OA]

595

Dahl TW(2016) Identifying remnants of early Earth. Science 352, 768-769. DOI:10.1126/science.aaf2482 (08.16)

596

Lenton T, Dahl TW, Daines S, Mills B, Ozaki K, Saltzman MR, Porada P (2016) Earliest land plants created modern levels of atmospheric oxygen. Proc Natl Acad Sci 113: 9704–9709 (08.16)

597

Martínez-Pérez C, Mohr W, Löscher CR, Dekaezemacker J, Littmann S, Yilmaz P, Lehnen N, Fuchs BM, Lavik G, Schmitz RA, LaRoche J, Kuypers MMM (2016) The small unicellular diazotrophic symbiont UCYN-A, is a key player in the marine nitrogen cycle. Nature Microbiology, 16163. DOI:10.1038/NMICROBIOL.2016.163 (09.16) [OA]

598

Bristow LA, Dalsgaard T, Tiano L, Mills DB, Bertagnolli AD, Wright JJ, Hallam SJ, Ulloa O, Canfield DE, Revsbech NP, Thamdrup B (2016) Ammonium and nitrite oxidation at nanomolar oxygen concentrations in oxygen minimum zone waters. PNAS 113: 10601-10606. DOI:10.1073/pnas.1600359113 (09.16) [OA]

599

Leduc D, Rowden AA, Glud RN, Wenzhöfer F, Kitazato H, Clark MR (2016) Comparison between infaunal communities of the deep floor and edge of the Tonga Trench: Possible effects of differences in organic matter supply. Deep-sea Research I: 116: 264-275. DOI:10.1016/j.dsr.2015.11.003 (published online Sep 6) (09.16) [OA]

600

Wenzhöfer F, Oguri K, Middelboe M, Turnewitsch R, Toyofuku T, Kitazato H, Glud RN (2016) Benthic carbon mineralization in hadal trenches: Assessment by in situ O2 microprofile measurements. Deep-sea Research I: 116: 276-286. DOI:10.1016/j.dsr.2016.08.013 (published online Sep 6) (09.16) [OA]

601

Glud RN, Berg P, Stahl, H, Hume A, Larsen M, Eyre BD, Cook PLM (2016) Benthic carbon mineralization and nutrient turnover in a Scottish sea loch: An integrative in situ study. Geochem DOI:10.1007/s10498-016-9300-8 (published online Sep 8) (09.16) [OA]

602

Mills DB, Canfield DE (2016) A trophic framework for animal origins. Geobiology DOI: 10.1111/gbi.12216 (published online Sep 29) (09.16) [OA]

603

Sjöqvist ASL, Lindgren P, Sturkell EFF, Hogmalm KJ, Broman C, Ivarsson M, Lee MR (2016) Shock metamorphism and hydrothermal alteration of mafic impact ejecta from the Lockne impact structure, Sweden. GFF. DOI:10.1080/11035897.2016.1227361 (published online Sep 29) (09.16) [OA]

604

Fiedler B, Grundle DS, Schütte F, Karstensen J, Löscher CR, Hauss H, Wagner H, Loginova A, Kiko R, Silva P, Tanhua T, Körtzinger A (2016) Oxygen utilization and downward carbon flux in an oxygen-depleted eddy in the eastern tropical North Atlantic. Biogeosciences 13: 5633-5647. DOI:10.5194/bg-13-5633-2016 (10.16) [OA]

605

Scholz F, Löscher CR, Fiskal A, Sommer S, Hensen C, Lomnitz U, Wuttig K, Göttlicher J, Kossel E, Steininger R, Canfield DE (2016) Nitrate-dependent iron oxidation limits iron transport in anoxic ocean regions, Earth and Planetary Science Letters, DOI:10.1016/j.epsl.2016.09.025. (10.16)

606

Réblova M, Hubka V, Thureborn O, Lundberg J, Sallstedt T, Wedin M, Ivarsson M (2016) From the Tunnels into the Treetops: New Lineages of Black Yeasts from Biofilm in the Stockholm Metro System and Their Relatives among Ant-Associated Fungi in the Chaetothyriales. PLoS ONE 11(10): e0163396. DOI:10.1371/journal. pone.0163396 (10.16) [OA]

607

Rodler AS, Frei R, Gaucher C, Germs GJB (2016) Chromium isotope, REE and redox-sensitive trace element chemostratigraphy across the late Neoproterozoic Ghaub glaciation, Otavi Group, Namibia. Precambrian Research 286: 234-249. DOI:10.1016/j.precamres.2016.10.007. Free access until December 3, 2016: http://authors.elsevier.com/a/1Ttbz14fdGear6 (10.16)

608

Hasler-Sheetal H, Castorani MCN, Glud RN, Canfield DE, Holmer M (2016) Metabolomics reveals cryptic interactive effects of species interactions and environmental stress on nitrogen and sulfur metabolism in seagrass. Environmental Science & Technology. DOI: 10.1021/acs.est.6b04647 (11.16)

609

Kamp A, Stief P, Bristow LA, Thamdrup B, Glud RN (2016) Intracellular Nitrate of Marine Diatoms as a Driver of Anaerobic Nitrogen Cycling in Sinking Aggregates. Front. Microbiol. 7:1669. DOI: 10.3389/fmicb.2016.01669 (11.16) [OA]

610

Ahm ASC, Bjerrum CJ, Hammarlund EU (2016) Disentangling the record of diagenesis, local redox conditions, and global seawater chemistry during the latest Ordovician glaciation. Earth and Planetary Science Letters (available online) (11.16)

611

Oakes JM, Rysgaard S, Glud RN, Eyre BD (2016) The transformation and fate of sub-Arctic microphytobenthos carbon revealed through 13C-labeling. Limnology and Oceanography 61: 2296-2308. (11.16)

612

Grimm R, Notz D, Glud RN, Rysgaard S, Six KD (2016) Assessment of the sea-ice carbon pump: Insights from a three-dimensional ocean-sea-ice-biogeochemical model (MPIOM/HAMOCC). Elementa: Science of the Anthropocene 4: 000136 DOI:10.12952/journal.elementa.000136 (11.16)

613

Dyrberg NR, Treusch AH, Wiegand C (2016) Virtual laboratories in science education: students’ motivation and experiences in two tertiary biology courses. Journal of Biological Education DOI: 10.1080/00219266.2016.1257498 (11.16)

614

Larsen M, Lehner P, Borisov SM, Klimant I, Fischer JP, Stewart FJ, Canfield DE, Glud RN (2016) In situ quantification of ultra-low O2 concentrations in oxygen minimum zones: Application of novel optodes. Limnology and Oceanography: Methods 14: 784-800 (12.16)